Integrating IFS Parts Work with EMDR: What to Do When the Models Pull in Different Directions
Trauma Specialists Training Institute
March 20, 2026 · 3 min read

Most clinicians who train in both Internal Family Systems and EMDR eventually run into the same question. The two models do not contradict each other in theory, but in the room they can feel like they are pulling in different directions. EMDR wants a target. IFS wants to know who in the system has feelings about that target. If you have ever paused mid-protocol because a part stepped forward and said it was not ready, you already know the question.
IFS has a growing evidence base of its own, and there is no single integration with EMDR that is correct. There are a few ways of holding the two models together that tend to work.
Treat Parts as Part of Assessment
Treat parts as part of the assessment, not an interruption to it. Before naming a target, it helps to know which parts are connected to the memory, which protectors are active around it, and whether the part most closely tied to the memory has any awareness that it is being approached. This is not a long process. Sometimes it is two questions. The information changes how you set up the target and what you do when reprocessing slows.
This is especially important for complex trauma populations, where the system is more likely to have well-organized protectors and more layered parts.
Let Protectors Set the Pace
Let protectors set the pace. If a manager or a firefighter tells you the system is not ready to move into a memory, the right response is usually to believe it. Forcing a target through protector objection is one of the more reliable ways to produce abreaction without integration. Slowing down to negotiate access is not a detour. It is the work that lets reprocessing actually finish. Schwartz and Sweezy on working with protector parts is the canonical reference for this stance.
When a Part Shows Up Mid-Processing
Know what to do when a part shows up mid-processing. The instinct trained into many EMDR clinicians is to keep going. The instinct trained into many IFS clinicians is to stop and unblend. Both can be right depending on what is happening. A useful middle path is to pause briefly, acknowledge the part, ask whether the part wants the processing to continue, and proceed based on the answer. Often the part simply wanted to be seen and the processing resumes on its own. Sometimes the answer is no, and that is information.
The Honest Tensions
A few honest tensions remain. IFS holds that the Self is always present and accessible. EMDR holds that some material is best approached through bilateral stimulation rather than dialogue. These are different theories of change, and clinicians who use both develop their own sense of when each applies. The question is not which model is right. The question is which model is serving this client in this moment.
If you are newer to integrating the two, the safest starting point is to use IFS in preparation and assessment, EMDR in reprocessing, and to slow down whenever a part objects. For clinicians newer to complex trauma or to working with the part most closely tied to a memory, this is the version of the integration that holds up best. You will refine from there.
About the Author
Trauma Specialists Training Institute
Trauma Specialists Training Institute trains clinicians in EMDR, complex trauma treatment, and the integration of evidence-based trauma modalities.


